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#54 Seeding methods for read alignment with Markus Schmidt
In this episode, Markus Schmidt explains how seeding in read alignment works. We define and compare k-mers, minimizers, MEMs, SMEMs, and maximal spanning seeds. Markus also presents his recent work on computing variable-...
About This Episode
#54 Seeding methods for read alignment with Markus Schmidt is an episode from the bioinformatics chat by Roman Cheplyaka. In this episode, Markus Schmidt explains how seeding in read alignment works. We define and compare k-mers, minimizers...
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This episode belongs to the bioinformatics chat.
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Episode Details
Published Dec 16, 2020, 01:00:46 long, audio available.
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