#68 Phylogenetic inference from raw reads and Read2Tree with David Dylus

In this episode, David Dylus talks about Read2Tree , a tool that builds alignment matrices and phylogenetic trees from raw sequencing reads. By leveraging the database of orthologous genes called OMA , Read2Tree bypasses traditional, time-consuming steps such as genome assembly, annotation and all-versus-all sequence comparisons. Links: Inference of phylogenetic trees directly from raw sequencing reads using Read2Tree (David Dylus, Adrian Altenhoff, Sina Majidian, Fritz J. Sedlazeck, Christophe Dessimoz) Background story Read2Tree on GitHub OMA browser The Guardian’s podcast about Victoria Amelina and Volodymyr Vakulenko

You can listen to #68 Phylogenetic inference from raw reads and Read2Tree with David Dylus online on Radio and Podcast. Open the player on this page to stream the available audio.

#68 Phylogenetic inference from raw reads and Read2Tree with David Dylus is an episode from the bioinformatics chat by Roman Cheplyaka.

This episode is 00:49:11 long.

This episode was published on Aug 28, 2023.

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