#51 Basset and Basenji with David Kelley

the bioinformatics chat by Roman Cheplyaka

Oct 7, 202001:13:58Science & Medicine

In this episode, Jacob Schreiber interviews David Kelley about machine learning models that can yield insight into the consequences of mutations on the genome. They begin their discussion by talking about Calico Labs, an...

Related Episodes

Continue listening to more episodes from the bioinformatics chat.

#70 Prioritizing drug target genes with Marie Sadler

Dec 21, 2023 - 00:52:20

In this episode, Marie Sadler talks about her recent Cell Genomics paper, Multi-layered genetic approache...

#69 Suffix arrays in optimal compressed space and δ-SA with Tomasz Kociumaka and Dominik Kempa

Sep 29, 2023 - 00:56:46

Today on the podcast we have Tomasz Kociumaka and Dominik Kempa , the authors of the preprint Collapsing...

#68 Phylogenetic inference from raw reads and Read2Tree with David Dylus

Aug 28, 2023 - 00:49:11

In this episode, David Dylus talks about Read2Tree , a tool that builds alignment matrices and phylogenet...

#67 AlphaFold and variant effect prediction with Amelie Stein

Jul 29, 2023 - 00:35:25

This is the third and final episode in the AlphaFold series, originally recorded on February 23, 2022, wi...

#66 AlphaFold and shape-mers with Janani Durairaj

Jul 10, 2023 - 00:20:51

This is the second episode in the AlphaFold series, originally recorded on February 14, 2022, with Janani...

#65 AlphaFold and protein interactions with Pedro Beltrao

Jun 21, 2023 - 00:52:23

In this episode, originally recorded on February 9, 2022, Roman talks to Pedro Beltrao about AlphaFold, t...

#64 Enformer: predicting gene expression from sequence with Žiga Avsec

Nov 9, 2021 - 00:59:41

In this episode, Jacob Schreiber interviews Žiga Avsec about a recently released model, Enformer . Their...

#63 Bioinformatics Contest 2021 with Maksym Kovalchuk and James Matthew Holt

Sep 27, 2021 - 01:00:47

The Bioinformatics Contest is back this year, and we are back to discuss it! This year’s contest winners...